Other File Downloads

Ontology-Related Files

These files contain ontology or ontology-related data

File / Format Download Updated
Terms, IDs, secondary IDs, obsoletes
Tab-delimited text file containing GO term IDs, secondary IDs, names, ontology, and obsolete marker in the format:

GO:0000001    mitochondrion inheritance P

GO:0000002    mitochondrial genome maintenance P obs

GO:0000003    GO:0019952    reproduction P

Daily

Terms and IDs

to be deprecated: please use the "Terms, IDs, secondary IDs, obsoletes" file above

Tab-delimited text file containing GO term IDs, names and ontologies in the format:

GO:0000001 mitochondrion inheritance P

GO:0000002 mitochondrial genome maintenance P

Daily

Terms, IDs and obsoletes

strong>to be deprecated: please use the "Terms, IDs, secondary IDs, obsoletes" file above

As above, but with an extra column indicating whether a term is obsolete or not:

GO:0000001 mitochondrion inheritance P

GO:0000002 mitochondrial genome maintenance P obs

Daily
Obsolete terms and alternatives
Tab-delimited text files containing obsolete GO term IDs and either suggested (obsoletes-exact) or possible (obsoletes-inexact) terms to annotate to instead.
As required
Monthly Reports
Reports giving a summary of ontology changes each month (plain text).
Monthly Reports directory Monthly

References and Evidence Codes

File / Format Download Updated
Database cross-reference list
A list of the abbreviations used by GO in database cross-references.
See also the dbxref Documentation (plain text).
As required
GO reference collection
references for use in annotation
As required
Evidence codes
OBO v1.2 format
Available from the OBO website as the evidence code ontology; see also the Guide to GO evidence codes.
As required