10:08:2005 10:07 gwg mouse_anatomy_stages autogenerated-by: DAG-Edit version 1.311 saved-by: hjd date: Wed May 9 11:27:11 EDT 2002 version: $Revision: 1.2 $ The Anatomical Dictionary for Mouse Development has been developed at the Department of Anatomy, University of Edinburgh, Scotland and the MRC Human Genetics Unit, Edinburgh as part of the Edinburgh Mouse Atlas project (EMAP), in collaboration with the Gene Expression (GXD) project at MGI, The Jackson Laboratory, Bar Harbor, ME. Copyright 1998-2002 University of Edinburgh (UK) and MRC (UK). Questions and comments should be sent to Jonathan Bard (J.Bard@ed.ac.uk) The file 'Mouse_anatomy_by_time_xproduct' contains the stage-specific anatomical structures. The anatomical structures for each developmental stage are listed hierarchically in the form of a tree structure, using part-of relationships. The developmental stage (Theiler stage = TS) is displayed followed by the 'print name' for the anatomical structure. The print names are generated by GXD to unambiguously identify anatomical structures for the user. If the name for a node is unambiguous, only the node name itself is displayed. Otherwise, the node's name is followed by a minimal number of parent node's names to provide sufficient context. The EMAP id refers to the respective stage-specific anatomical structure. mouse_anatomy_stages This is an OWL translation of an ontology whose native representational form is .obo. The translation was performed using the oboInOwl xslt library. For details, see http://www.berkeleybop.org/obo-conv.cgi Mouse_anatomy_by_time_xproduct mouse_anatomy_stages TS1,first polar body mouse_anatomy_stages TS3,second polar body mouse_anatomy_stages TS9,mural trophectoderm mouse_anatomy_stages TS14,right,vitelline vein,venous system,cardiovascular system,extraembryonic component mouse_anatomy_stages TS25,epidermis,skin,interdigital region between digits 2 and 3,footplate mouse_anatomy_stages TS25,interdigital region between digits 3 and 4,footplate mouse_anatomy_stages TS25,mesenchyme,interdigital region between digits 3 and 4,footplate mouse_anatomy_stages TS25,skin,interdigital region between digits 3 and 4,footplate mouse_anatomy_stages TS25,dermis,skin,interdigital region between digits 3 and 4,footplate mouse_anatomy_stages TS25,epidermis,skin,interdigital region between digits 3 and 4,footplate mouse_anatomy_stages TS25,interdigital region between digits 4 and 5,footplate mouse_anatomy_stages TS25,mesenchyme,interdigital region between digits 4 and 5,footplate mouse_anatomy_stages TS25,skin,interdigital region between digits 4 and 5,footplate mouse_anatomy_stages TS25,dermis,skin,interdigital region between digits 4 and 5,footplate mouse_anatomy_stages TS15,embryo mouse_anatomy_stages TS25,epidermis,skin,interdigital region between digits 4 and 5,footplate mouse_anatomy_stages TS25,mesenchyme,footplate mouse_anatomy_stages TS25,skin,footplate mouse_anatomy_stages TS25,dermis,skin,footplate mouse_anatomy_stages TS25,epidermis,skin,footplate mouse_anatomy_stages TS25,plantar pads mouse_anatomy_stages TS15,branchial arch mouse_anatomy_stages TS25,leg mouse_anatomy_stages TS25,hip mouse_anatomy_stages TS25,mesenchyme,hip mouse_anatomy_stages TS25,skin,hip mouse_anatomy_stages TS25,dermis,skin,hip mouse_anatomy_stages TS25,epidermis,skin,hip mouse_anatomy_stages TS25,knee mouse_anatomy_stages TS25,mesenchyme,knee mouse_anatomy_stages TS15,1st arch mouse_anatomy_stages TS25,skin,knee mouse_anatomy_stages TS25,dermis,skin,knee mouse_anatomy_stages TS25,epidermis,skin,knee mouse_anatomy_stages TS25,lower leg mouse_anatomy_stages TS25,mesenchyme,lower leg mouse_anatomy_stages TS15,branchial groove,1st arch mouse_anatomy_stages TS25,skin,lower leg mouse_anatomy_stages TS25,dermis,skin,lower leg mouse_anatomy_stages TS25,epidermis,skin,lower leg mouse_anatomy_stages TS25,upper leg mouse_anatomy_stages TS15,ectoderm,branchial groove,1st arch mouse_anatomy_stages TS25,mesenchyme,upper leg mouse_anatomy_stages TS25,skin,upper leg mouse_anatomy_stages TS25,dermis,skin,upper leg mouse_anatomy_stages TS25,epidermis,skin,upper leg mouse_anatomy_stages TS25,mesenchyme,embryo mouse_anatomy_stages TS25,head mesenchyme mouse_anatomy_stages TS25,trunk mesenchyme mouse_anatomy_stages TS15,branchial membrane,1st arch mouse_anatomy_stages TS25,body-wall mesenchyme mouse_anatomy_stages TS25,cardiovascular system mouse_anatomy_stages TS25,arterial system mouse_anatomy_stages TS25,aorta mouse_anatomy_stages TS25,arch of aorta mouse_anatomy_stages TS25,thoracic aorta mouse_anatomy_stages TS25,ascending,thoracic aorta mouse_anatomy_stages TS25,descending,thoracic aorta mouse_anatomy_stages TS25,dorsal aorta mouse_anatomy_stages TS25,abdominal aorta mouse_anatomy_stages TS15,ectoderm,branchial membrane,1st arch mouse_anatomy_stages TS25,axillary artery mouse_anatomy_stages TS25,epigastric artery mouse_anatomy_stages TS25,inferior,epigastric artery mouse_anatomy_stages TS25,superior,epigastric artery mouse_anatomy_stages TS25,intercostal artery mouse_anatomy_stages TS25,greater palatine artery mouse_anatomy_stages TS25,basilar artery mouse_anatomy_stages TS25,bronchial artery mouse_anatomy_stages TS25,carotid artery mouse_anatomy_stages TS25,common,carotid artery mouse_anatomy_stages TS15,endoderm,branchial membrane,1st arch mouse_anatomy_stages TS25,external,carotid artery mouse_anatomy_stages TS25,internal,carotid artery mouse_anatomy_stages TS25,cerebral artery mouse_anatomy_stages TS25,anterior,cerebral artery mouse_anatomy_stages TS25,middle,cerebral artery mouse_anatomy_stages TS25,posterior,cerebral artery mouse_anatomy_stages TS25,hepatic artery mouse_anatomy_stages TS25,hyoid artery mouse_anatomy_stages TS25,iliac artery mouse_anatomy_stages TS25,common,iliac artery mouse_anatomy_stages TS15,branchial pouch,1st arch mouse_anatomy_stages TS25,external,iliac artery mouse_anatomy_stages TS25,internal,iliac artery mouse_anatomy_stages TS25,innominate artery mouse_anatomy_stages TS25,internal thoracic artery mouse_anatomy_stages TS25,maxillary artery mouse_anatomy_stages TS25,mesenteric artery mouse_anatomy_stages TS25,inferior,mesenteric artery mouse_anatomy_stages TS25,superior,mesenteric artery mouse_anatomy_stages TS25,ophthalmic artery mouse_anatomy_stages TS9,primary trophoblast giant cells mouse_anatomy_stages TS15,endoderm,branchial pouch,1st arch mouse_anatomy_stages TS25,ovarian artery mouse_anatomy_stages TS25,communicating artery mouse_anatomy_stages TS25,anterior,communicating artery mouse_anatomy_stages TS25,posterior,communicating artery mouse_anatomy_stages TS25,principal artery to forelimb mouse_anatomy_stages TS25,principal artery to hindlimb mouse_anatomy_stages TS25,pulmonary artery mouse_anatomy_stages TS25,pulmonary trunk mouse_anatomy_stages TS25,renal artery mouse_anatomy_stages TS25,spinal artery mouse_anatomy_stages TS15,mandibular component,1st arch mouse_anatomy_stages TS25,anterior,spinal artery mouse_anatomy_stages TS25,posterior,spinal artery mouse_anatomy_stages TS25,stapedial artery mouse_anatomy_stages TS25,subclavian artery mouse_anatomy_stages TS25,testicular artery mouse_anatomy_stages TS25,thyroid artery mouse_anatomy_stages TS25,inferior,thyroid artery mouse_anatomy_stages TS25,superior,thyroid artery mouse_anatomy_stages TS25,umbilical artery mouse_anatomy_stages TS25,left,umbilical artery mouse_anatomy_stages TS15,ectoderm,mandibular component,1st arch mouse_anatomy_stages TS25,right,umbilical artery mouse_anatomy_stages TS25,vertebral artery mouse_anatomy_stages TS25,ductus arteriosus mouse_anatomy_stages TS25,blood mouse_anatomy_stages TS25,heart mouse_anatomy_stages TS25,aortic sinus mouse_anatomy_stages TS25,atrio-ventricular canal mouse_anatomy_stages TS25,atrio-ventricular cushion tissue mouse_anatomy_stages TS25,atrium mouse_anatomy_stages TS25,interatrial septum mouse_anatomy_stages TS15,endoderm,mandibular component,1st arch mouse_anatomy_stages TS25,foramen ovale,interatrial septum mouse_anatomy_stages TS25,septum primum mouse_anatomy_stages TS25,foramen secundum mouse_anatomy_stages TS25,septum secundum mouse_anatomy_stages TS25,left atrium mouse_anatomy_stages TS25,auricular region,left atrium mouse_anatomy_stages TS25,endocardial lining,auricular region,left atrium mouse_anatomy_stages TS25,cardiac muscle,auricular region,left atrium mouse_anatomy_stages TS25,endocardial lining,left atrium mouse_anatomy_stages TS25,cardiac muscle,left atrium mouse_anatomy_stages TS15,mesenchyme,mandibular component,1st arch mouse_anatomy_stages TS25,right atrium mouse_anatomy_stages TS25,auricular region,right atrium mouse_anatomy_stages TS25,endocardial lining,auricular region,right atrium mouse_anatomy_stages TS25,cardiac muscle,auricular region,right atrium mouse_anatomy_stages TS25,endocardial lining,right atrium mouse_anatomy_stages TS25,cardiac muscle,right atrium mouse_anatomy_stages TS25,valve,right atrium mouse_anatomy_stages TS25,venous valve,valve,right atrium mouse_anatomy_stages TS25,bulbar cushion mouse_anatomy_stages TS25,endocardial cushion tissue mouse_anatomy_stages TS15,mesenchyme derived from head mesoderm,mesenchyme,mandibular component,1st arch mouse_anatomy_stages TS25,endocardial tissue mouse_anatomy_stages TS25,mesentery,heart mouse_anatomy_stages TS25,dorsal mesocardium mouse_anatomy_stages TS25,transverse pericardial sinus mouse_anatomy_stages TS25,trabeculae carneae mouse_anatomy_stages TS25,valve,heart mouse_anatomy_stages TS25,aortic valve mouse_anatomy_stages TS25,leaflets,aortic valve mouse_anatomy_stages TS25,mitral valve mouse_anatomy_stages TS15,mesenchyme derived from neural crest,mesenchyme,mandibular component,1st arch mouse_anatomy_stages TS25,leaflets,mitral valve mouse_anatomy_stages TS25,pulmonary valve mouse_anatomy_stages TS25,leaflets,pulmonary valve mouse_anatomy_stages TS25,tricuspid valve mouse_anatomy_stages TS25,leaflets,tricuspid valve mouse_anatomy_stages TS25,ventricle mouse_anatomy_stages TS25,interventricular groove mouse_anatomy_stages TS25,interventricular septum mouse_anatomy_stages TS25,endocardial lining,interventricular septum mouse_anatomy_stages TS25,membranous part,interventricular septum mouse_anatomy_stages TS15,maxillary component,1st arch mouse_anatomy_stages TS25,muscular part,interventricular septum mouse_anatomy_stages TS25,left ventricle mouse_anatomy_stages TS25,endocardial lining,left ventricle mouse_anatomy_stages TS25,cardiac muscle,left ventricle mouse_anatomy_stages TS25,right ventricle mouse_anatomy_stages TS25,endocardial lining,right ventricle mouse_anatomy_stages TS25,cardiac muscle,right ventricle mouse_anatomy_stages TS25,lymphatic system mouse_anatomy_stages TS25,jugular lymph sac mouse_anatomy_stages TS25,venous system mouse_anatomy_stages TS15,ectoderm,maxillary component,1st arch mouse_anatomy_stages TS25,brain,venous system mouse_anatomy_stages TS25,hindbrain,brain,venous system mouse_anatomy_stages TS25,sinus,hindbrain,brain,venous system mouse_anatomy_stages TS25,venous dural,sinus,hindbrain,brain,venous system mouse_anatomy_stages TS25,transverse,venous dural,sinus,hindbrain,brain,venous system mouse_anatomy_stages TS25,azygos vein mouse_anatomy_stages TS25,axillary vein mouse_anatomy_stages TS25,epigastric vein mouse_anatomy_stages TS15,endoderm,maxillary component,1st arch mouse_anatomy_stages TS25,inferior,epigastric vein mouse_anatomy_stages TS25,superior,epigastric vein mouse_anatomy_stages TS25,intercostal vein mouse_anatomy_stages TS25,common iliac vein mouse_anatomy_stages TS25,ductus venosus mouse_anatomy_stages TS25,jugular vein mouse_anatomy_stages TS25,external,jugular vein mouse_anatomy_stages TS25,internal,jugular vein mouse_anatomy_stages TS25,femoral vein mouse_anatomy_stages TS25,hepatico-cardiac vein mouse_anatomy_stages TS9,polar trophectoderm mouse_anatomy_stages TS15,mesenchyme,maxillary component,1st arch mouse_anatomy_stages TS25,left,hepatico-cardiac vein mouse_anatomy_stages TS25,right,hepatico-cardiac vein mouse_anatomy_stages TS25,hemiazygos vein mouse_anatomy_stages TS25,vena cava mouse_anatomy_stages TS25,inferior,vena cava mouse_anatomy_stages TS25,post-hepatic part,inferior,vena cava mouse_anatomy_stages TS25,pre-hepatic part,inferior,vena cava mouse_anatomy_stages TS25,superior,vena cava mouse_anatomy_stages TS25,left,superior,vena cava mouse_anatomy_stages TS25,right,superior,vena cava mouse_anatomy_stages TS15,mesenchyme derived from head mesoderm,mesenchyme,maxillary component,1st arch mouse_anatomy_stages TS25,internal thoracic vein mouse_anatomy_stages TS25,mesenteric vein mouse_anatomy_stages TS25,inferior,mesenteric vein mouse_anatomy_stages TS25,superior,mesenteric vein mouse_anatomy_stages TS25,ovarian vein mouse_anatomy_stages TS25,portal vein mouse_anatomy_stages TS25,principal vein of forelimb mouse_anatomy_stages TS25,principal vein of hindlimb mouse_anatomy_stages TS25,pulmonary vein mouse_anatomy_stages TS15,mesenchyme derived from neural crest,mesenchyme,maxillary component,1st arch mouse_anatomy_stages TS25,spinal vein mouse_anatomy_stages TS25,subclavian vein mouse_anatomy_stages TS25,superior vesical vein mouse_anatomy_stages TS25,testicular vein mouse_anatomy_stages TS25,thyroid vein mouse_anatomy_stages TS25,inferior,thyroid vein mouse_anatomy_stages TS25,superior,thyroid vein mouse_anatomy_stages