Compare GO annotations for ORTHOMCL1423 PPOD cluster

Possible outliers might be spotted in a summary/comparison table of high level GO categories.
Complete table of the annotations represented in this image is provided below.

Annotations are indicated by colored nodes: human, mouse, rat, chicken, zfish, fly, worm, dicty, dicot, yeast, pombe, ecoli.
Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Red arrows indicate "regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Chicken from GOA; Zfish from Zfin; Fly from Flybase; Worm from Wormbase; Dicot from TAIR; Dicty from Dictybase; Yeast from SGD; Pombe from Sanger; Ecoli from EcoliHub.
Organisms with experimental annotations are indicated: EXP, IC, IDA, IEP, IGI, IMP, IPI. In addition, ISS (ISA, ISM, ISO) annotations are so indicated.
Does not include evidence codes: IEA, IGC, NAS, ND, NR, RCA, TAS.
Graph is also available as SVG (requires viewer plug-in from Adobe)
Evidence codes are listed at the bottom of the page.
Graph generated Tue Jan 6 19:06:44 2009.

Compare annotations to GO categories for ORTHOMCL1423.

Entry indicates that ortholog exists for this gene.
Colored entries indicate experimental annotation.
Parentheses indicate ISS annotation only.

Category	ID	Term	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Molecular Function	GO:0005488	binding	Human	Mouse	Rat	Chicken	Zfish	(Fly)	(Worm)	(Dicty)	Dicot	X	X	X
Cellular Component	GO:0005623	cell	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	X	X	X
Cellular Component	GO:0044464	cell part	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	X	X	X
Cellular Component	GO:0031974	membrane-enclosed lumen	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	X	X	X
Cellular Component	GO:0043226	organelle	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	X	X	X
Cellular Component	GO:0044422	organelle part	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	X	X	X
Biological Process	GO:0065007	biological regulation	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	X	X	X
Biological Process	GO:0009987	cellular process	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	X	X	X
Biological Process	GO:0051179	localization	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	X	X	X
Biological Process	GO:0040011	locomotion	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	X	X	X
Biological Process	GO:0008152	metabolic process	Human	Mouse	(Rat)	Chicken	Zfish	Fly	(Worm)	Dicty	Dicot	X	X	X
Biological Process	GO:0032501	multicellular organismal process	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	X	X	X
Biological Process	GO:0048518	positive regulation of biological process	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	X	X	X
Biological Process	GO:0050789	regulation of biological process	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	X	X	X
Biological Process	GO:0000003	reproduction	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	X	X	X
Biological Process	GO:0022414	reproductive process	Human	Mouse	(Rat)	Chicken	Zfish	Fly	Worm	Dicty	Dicot	X	X	X

Full set of experimental (and ISS) annotations for ORTHOMCL1423

Category	ID	Term	DB Object	Evidence	With_From	Organism	Reference
Molecular Function	GO:0003729	mRNA binding	bru-3	ISS	EMBL:U16800	Fly	FB:FBrf0105495
Molecular Function	GO:0003729	mRNA binding	bru-3	ISS		Fly	FB:FBrf0129923\|PMID:10908586
Molecular Function	GO:0003729	mRNA binding	UNC-75	ISS	UniProtKB:O02374	Worm	WB:WBPaper00006029
Molecular Function	GO:0003676	nucleic acid binding	DDB_G0270634	ISS	InterPro:IPR000504	Dicty	dictyBase_REF:10155
Molecular Function	GO:0003723	RNA binding	DDB_G0291486	ISS		Dicty	dictyBase_REF:10155
Cellular Component	GO:0005737	cytoplasm	TNRC4	IDA		Human	PMID:17725984
Cellular Component	GO:0005737	cytoplasm	Tnrc4	IDA		Mouse	MGI:MGI:3766856\|PMID:17393433
Cellular Component	GO:0005737	cytoplasm	Tnrc4	ISS	RGD:1319873	Rat	RGD:1624291
Cellular Component	GO:0005737	cytoplasm	Tnrc4	ISS	RGD:1319874	Rat	RGD:1624291
Cellular Component	GO:0016607	nuclear speck	UNC-75	IDA		Worm	WB:WBPaper00006029
Cellular Component	GO:0005634	nucleus	TNRC4	IDA		Human	PMID:17725984
Cellular Component	GO:0005634	nucleus	Tnrc4	IDA		Mouse	MGI:MGI:3766856\|PMID:17393433
Cellular Component	GO:0005634	nucleus	Tnrc4	ISS	RGD:1319873	Rat	RGD:1624291
Cellular Component	GO:0005634	nucleus	Tnrc4	ISS	RGD:1319874	Rat	RGD:1624291
Cellular Component	GO:0045335	phagocytic vesicle	DDB_G0270634	IDA		Dicty	dictyBase_REF:11413\|PMID:16926386
Biological Process	GO:0040011	locomotion	unc-75	IMP	WB:e950\|WB:WBPhenotype:0000643	Worm	WB:WBPaper00006029\|PMID:12906792
Biological Process	GO:0040011	locomotion	unc-75	IMP	WB:md1290\|WB:WBPhenotype:0000643	Worm	WB:WBPaper00006029\|PMID:12906792
Biological Process	GO:0040011	locomotion	unc-75	IMP	WB:md1344\|WB:WBPhenotype:0000643	Worm	WB:WBPaper00006029\|PMID:12906792
Biological Process	GO:0040011	locomotion	unc-75	IMP	WB:md1345\|WB:WBPhenotype:0000643	Worm	WB:WBPaper00006029\|PMID:12906792
Biological Process	GO:0040011	locomotion	unc-75	IMP	WB:md1357\|WB:WBPhenotype:0000643	Worm	WB:WBPaper00006029\|PMID:12906792
Biological Process	GO:0040011	locomotion	unc-75	IMP	WB:md1364\|WB:WBPhenotype:0000643	Worm	WB:WBPaper00006029\|PMID:12906792
Biological Process	GO:0040011	locomotion	unc-75	IMP	WB:md1395\|WB:WBPhenotype:0000643	Worm	WB:WBPaper00006029\|PMID:12906792
Biological Process	GO:0040011	locomotion	unc-75	IMP	WB:md1900\|WB:WBPhenotype:0000643	Worm	WB:WBPaper00006029\|PMID:12906792
Biological Process	GO:0016071	mRNA metabolic process	UNC-75	ISS	UniProtKB:O02374	Worm	WB:WBPaper00006029
Biological Process	GO:0032224	positive regulation of synaptic transmission, cholinergic	unc-75	IMP	WB:e950	Worm	WB:WBPaper00006029
Biological Process	GO:0032230	positive regulation of synaptic transmission, GABAergic	unc-75	IMP	WB:e950	Worm	WB:WBPaper00006029
Biological Process	GO:0000381	regulation of alternative nuclear mRNA splicing, via spliceosome	BRUNOL6	IDA		Human	PMID:14761971
Biological Process	GO:0000381	regulation of alternative nuclear mRNA splicing, via spliceosome	TNRC4	IDA		Human	PMID:11158314
Biological Process	GO:0000381	regulation of alternative nuclear mRNA splicing, via spliceosome	Tnrc4	ISS	RGD:1319873	Rat	RGD:1624291
Biological Process	GO:0008380	RNA splicing	TNRC4	IMP		Human	PMID:17725984
Biological Process	GO:0008380	RNA splicing	Tnrc4	ISS	RGD:1319873	Rat	RGD:1624291
Biological Process	GO:0030317	sperm motility	Tnrc4	IMP	MGI:MGI:3767553	Mouse	MGI:MGI:3766856\|PMID:17393433
Biological Process	GO:0030317	sperm motility	Tnrc4	ISS	RGD:1319874	Rat	RGD:1624291
Biological Process	GO:0007283	spermatogenesis	Tnrc4	IMP	MGI:MGI:3767553	Mouse	MGI:MGI:3766856\|PMID:17393433
Biological Process	GO:0007283	spermatogenesis	Tnrc4	ISS	RGD:1319874	Rat	RGD:1624291

Gene Ontology Evidence Code Abbreviations:

IC Inferred by curator

IDA Inferred from direct assay

IEA Inferred from electronic annotation

IEP Inferred from expression pattern

IGC Inferred from genomic context

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

NAS Non-traceable Author Statement

ND No biological data available

RCA Reviewed computational analysis

TAS Traceable author statement

NR Not recorded (appears in some legacy annotations)