Compare GO annotations for PEX10 and its Reference Genomes orthologs

Compare GO annotations for PEX10 and its orthologs

Possible outliers might be spotted in a summary/comparison table of high level GO categories.
Complete table of the annotations represented in this image is provided below.

Annotations are indicated by colored nodes: human, mouse, rat, chicken, zfish, fly, worm, dicty, dicot, yeast, pombe, ecoli.
Gray arrows indicate "is_a"; Blue arrows indicate "part_of"; Red arrows indicate "regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Chicken from GOA; Zfish from Zfin; Fly from Flybase; Worm from Wormbase; Dicot from TAIR; Dicty from Dictybase; Yeast from SGD; Pombe from Sanger; Ecoli from EcoliHub.
Organisms with experimental annotations are indicated: IC, IDA, IEP, IGI, IMP, IPI. In addition, ISS annotations are so indicated.
Does not include evidence codes: IEA, IGC, NAS, ND, NR, RCA, TAS.
Graph is also available as SVG (requires viewer plug-in from Adobe)
Evidence codes are listed at the bottom of the page.
Graph generated Tue Apr 15 17:13:37 2008.

Compare annotations to GO categories for PEX10.

Entry indicates that ortholog exists for this gene.
Colored entries indicate experimental annotation.
Parentheses indicate ISS annotation only.

Category	ID	Term	Human	Mouse	Rat	Chicken	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	Ecoli
Molecular Function	GO:0005488	binding	Human	X	(Rat)	X	Zfish	Fly	Worm	(Dicty)	Dicot	Yeast	(Pombe)	X
Molecular Function	GO:0003824	catalytic activity	Human	X	Rat	X	Zfish	Fly	Worm	Dicty	Dicot	Yeast	(Pombe)	X
Cellular Component	GO:0005623	cell	Human	X	Rat	X	Zfish	Fly	Worm	(Dicty)	Dicot	Yeast	Pombe	X
Cellular Component	GO:0044464	cell part	Human	X	Rat	X	Zfish	Fly	Worm	(Dicty)	Dicot	Yeast	Pombe	X
Cellular Component	GO:0043226	organelle	Human	X	Rat	X	Zfish	Fly	Worm	(Dicty)	Dicot	Yeast	Pombe	X
Cellular Component	GO:0044422	organelle part	Human	X	Rat	X	Zfish	Fly	Worm	(Dicty)	Dicot	Yeast	(Pombe)	X
Biological Process	GO:0065007	biological regulation	Human	X	Rat	X	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0009987	cellular process	Human	X	(Rat)	X	Zfish	(Fly)	Worm	(Dicty)	Dicot	Yeast	(Pombe)	X
Biological Process	GO:0032502	developmental process	Human	X	Rat	X	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0051234	establishment of localization	Human	X	(Rat)	X	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0040007	growth	Human	X	Rat	X	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0051179	localization	Human	X	(Rat)	X	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0008152	metabolic process	Human	X	Rat	X	Zfish	Fly	Worm	Dicty	Dicot	Yeast	(Pombe)	X
Biological Process	GO:0032501	multicellular organismal process	Human	X	Rat	X	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0048518	positive regulation of biological process	Human	X	Rat	X	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0050789	regulation of biological process	Human	X	Rat	X	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0000003	reproduction	Human	X	Rat	X	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X
Biological Process	GO:0022414	reproductive process	Human	X	Rat	X	Zfish	Fly	Worm	Dicty	Dicot	Yeast	Pombe	X

Full set of experimental (and ISS) annotations for PEX10

Category	ID	Term	DB Object	Evidence	Organism	Reference
Molecular Function	GO:0005515	protein binding	PEX10_HUMAN	IPI	Human	PMID:10837480
Molecular Function	GO:0005515	protein binding	Pex10	ISS	Rat	RGD:1624291
Molecular Function	GO:0005515	protein binding	pex10	ISS	Dicty	dictyBase_REF:10155
Molecular Function	GO:0005515	protein binding	PEX10	IPI	Yeast	SGD_REF:S000073142\|PMID:12667447
Molecular Function	GO:0004842	ubiquitin-protein ligase activity	pas4	ISS	Pombe	PMID:17072883
Molecular Function	GO:0008270	zinc ion binding	pex10	ISS	Dicty	dictyBase_REF:10155
Molecular Function	GO:0008270	zinc ion binding	pas4	ISS	Pombe	PMID:17072883
Cellular Component	GO:0005829	cytosol	PEX10	IDA	Dicot	TAIR:Publication:501717704\|PMID:16169966
Cellular Component	GO:0005783	endoplasmic reticulum	pas4	IDA	Pombe	PMID:16823372
Cellular Component	GO:0005778	peroxisomal membrane	Pex10	IDA	Rat	RGD:1580664\|PMID:14561759
Cellular Component	GO:0005778	peroxisomal membrane	pex10	ISS	Dicty	dictyBase_REF:10155
Cellular Component	GO:0005778	peroxisomal membrane	PEX10	IDA	Yeast	SGD_REF:S000073905\|PMID:12876220
Cellular Component	GO:0005778	peroxisomal membrane	pas4	ISS	Pombe	PMID:17072883
Cellular Component	GO:0005777	peroxisome	PEX10_HUMAN	IDA	Human	PMID:9922452
Cellular Component	GO:0005777	peroxisome	Pex10	ISS	Rat	RGD:1624291
Cellular Component	GO:0005777	peroxisome	PEX10	IDA	Dicot	TAIR:Publication:501717704\|PMID:16169966
Biological Process	GO:0010381	attachment of peroxisome to chloroplast	PEX10	IMP	Dicot	TAIR:Publication:501720824\|PMID:17215364
Biological Process	GO:0009792	embryonic development ending in birth or egg hatching	wrs-2	IMP	Worm	WB:WBPaper00024925\|PMID:15687288
Biological Process	GO:0009793	embryonic development ending in seed dormancy	PEX10	IMP	Dicot	TAIR:Publication:501711228\|PMID:14576288
Biological Process	GO:0006635	fatty acid beta-oxidation	PEX10	IMP	Dicot	TAIR:Publication:501721644\|PMID:17478547
Biological Process	GO:0007031	peroxisome organization and biogenesis	PEX10_HUMAN	IDA	Human	PMID:9700193
Biological Process	GO:0007031	peroxisome organization and biogenesis	Pex10	ISS	Rat	RGD:1624291
Biological Process	GO:0007031	peroxisome organization and biogenesis	CG7864	ISS	Fly	FB:FBrf0105495
Biological Process	GO:0007031	peroxisome organization and biogenesis	pex10	ISS	Dicty	dictyBase_REF:10155
Biological Process	GO:0007031	peroxisome organization and biogenesis	PEX10	IMP	Dicot	TAIR:Publication:501707655\|PMID:12883010
Biological Process	GO:0007031	peroxisome organization and biogenesis	pas4	ISS	Pombe	PMID:17072883
Biological Process	GO:0009853	photorespiration	PEX10	IMP	Dicot	TAIR:Publication:501720824\|PMID:17215364
Biological Process	GO:0040010	positive regulation of growth rate	wrs-2	IMP	Worm	WB:WBPaper00004403\|PMID:11099034
Biological Process	GO:0040010	positive regulation of growth rate	wrs-2	IMP	Worm	WB:WBPaper00005654\|PMID:12529635
Biological Process	GO:0040010	positive regulation of growth rate	wrs-2	IMP	Worm	WB:WBPaper00006395\|PMID:14551910
Biological Process	GO:0016558	protein import into peroxisome matrix	PEX10_HUMAN	IDA	Human	PMID:9683594
Biological Process	GO:0016558	protein import into peroxisome matrix	Pex10	ISS	Rat	RGD:1624291
Biological Process	GO:0016558	protein import into peroxisome matrix	PEX10	IMP	Dicot	TAIR:Publication:501721644\|PMID:17478547
Biological Process	GO:0016558	protein import into peroxisome matrix	PEX10	IMP	Yeast	SGD_REF:S000080261\|PMID:15536088
Biological Process	GO:0016567	protein ubiquitination	pas4	ISS	Pombe	PMID:17072883

Gene Ontology Evidence Code Abbreviations:

IC Inferred by curator

IDA Inferred from direct assay

IEA Inferred from electronic annotation

IEP Inferred from expression pattern

IGC Inferred from genomic context

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

ISA Inferred from sequence alignment

ISM Inferred from sequence model

ISO Inferred from sequence orthology

ISS Inferred from sequence or structural similarity

NAS Non-traceable Author Statement

ND No biological data available

RCA Reviewed computational analysis

TAS Traceable author statement

NR Not recorded (appears in some legacy annotations)